This class assembles the reaction source terms for all other transport equations, if there's any. More...

#include <reaction_source_terms.h>

Inheritance diagram for FuelCellShop::Equation::ReactionSourceTerms< dim >:

Collaboration diagram for FuelCellShop::Equation::ReactionSourceTerms< dim >:

Public Member Functions
Constructors, destructor, and initalization
	ReactionSourceTerms (FuelCell::SystemManagement &system_management)
	Constructor. More...

virtual	~ReactionSourceTerms ()
	Destructor. More...

virtual void	declare_parameters (ParameterHandler &param) const
	Declare parameters. More...

virtual void	initialize (ParameterHandler &param)
	Initialize parameters. More...

void	set_cathode_kinetics (FuelCellShop::Kinetics::BaseKinetics *kinetics)
	Set the pointer to cathode kinetics in the object. More...

void	set_anode_kinetics (FuelCellShop::Kinetics::BaseKinetics *kinetics)
	Set the pointer to anode kinetics in the object. More...

Local CG FEM based assemblers
virtual void	assemble_cell_matrix (FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	Assemble local cell matrix. More...

virtual void	assemble_cell_residual (FuelCell::ApplicationCore::FEVector &cell_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	Assemble local cell residual. More...

Accessors & Info
virtual void	adjust_internal_cell_couplings (std::vector< couplings_map > &dst, const std::vector< FuelCellShop::Material::PureGas * > &gases=std::vector< FuelCellShop::Material::PureGas * >())
	This function is used to adjust `std::vector` `<` `internal_cell_couplings` `>`, which is generated after getting `internal_cell_couplings` from all the equations being used in the application. More...

virtual void	print_equation_info () const
	This function prints out the `info` for this class. More...

bool	get_irrev_heat_ccl () const
	Method to get whether the ir-reversible heating due to `ORR`, inside the cathode catalyst layer is `ON` or `OFF` (irrev_heat_ccl). More...

bool	get_irrev_heat_acl () const
	Method to get whether the ir-reversible heating due to `HOR`, inside the anode catalyst layer is `ON` or `OFF` (irrev_heat_acl). More...

bool	get_rev_heat () const
	Method to get whether the reversible (entropic) heating due to net reaction forming liquid water product is `ON` or `OFF` (rev_heat). More...

double	get_factor_rev_heat_ccl () const
	Method to get the fraction of reversible heat released corresponding to half-cell reaction of `ORR`, inside the cathode catalyst layer (factor_rev_heat_ccl). More...

bool	get_water_vap_heat_ccl () const
	Method to get whether the heat sink due to evaoration of water produced during the ORR inside the athode catalyst layer is `ON` or `OFF` (water_vap_heat_ccl). More...

FuelCellShop::Kinetics::BaseKinetics *	get_cathode_kinetics () const
	Accessor for cathode catalyst layer FuelCellShop::Kinetics::BaseKinetics pointer. More...

FuelCellShop::Kinetics::BaseKinetics *	get_anode_kinetics () const
	Accessor for anode catalyst layer FuelCellShop::Kinetics::BaseKinetics pointer. More...

Public Member Functions inherited from FuelCellShop::Equation::EquationBase< dim >
virtual void	assemble_bdry_matrix (FuelCell::ApplicationCore::MatrixVector &bdry_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	Assemble local boundary matrix. More...

virtual void	assemble_bdry_residual (FuelCell::ApplicationCore::FEVector &bdry_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	Assemble local boundary residual. More...

const couplings_map &	get_internal_cell_couplings () const
	This function returns `internal_cell_couplings` of a derived equation class. More...

const couplings_map &	get_internal_flux_couplings () const
	This function returns `internal_flux_couplings` (DG FEM only) of a derived equation class. More...

const component_materialID_value_map &	get_component_materialID_value () const
	This function returns `component_materialID_value` of a derived equation class. More...

const component_boundaryID_value_map &	get_component_boundaryID_value () const
	This function returns `component_boundaryID_value` of a derived equation class. More...

const std::vector< BoundaryType > &	get_boundary_types () const
	This function returns `boundary_types` of a derived equation class. More...

const std::vector< std::vector < BoundaryType > > &	get_multi_boundary_types () const
	This function returns `multi_boundary_types` of a derived equation class. More...

const std::vector< OutputType > &	get_output_types () const
	This function returns `output_types` of a derived equation class. More...

const std::vector< std::vector < OutputType > > &	get_multi_output_types () const
	This function returns `multi_output_types` of a derived equation class. More...

const std::string &	get_equation_name () const
	This function returns `equation_name` of a derived equation class. More...

const std::vector< unsigned int > &	get_matrix_block_indices () const
	This function returns `matrix_block_indices` of a derived equation class. More...

const std::vector< unsigned int > &	get_residual_indices () const
	This function returns `residual_indices` of a derived equation class. More...

Protected Member Functions
Local CG FEM based assemblers - make_ functions
virtual void	make_assemblers_generic_constant_data ()
	This function computes Local CG FEM based assemblers - constant data (generic). More...

virtual void	make_assemblers_cell_constant_data (const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info)
	This function computes. More...

virtual void	make_assemblers_cell_variable_data (const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	This function computes. More...

virtual void	assemble_matrix_for_equation (FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, const std::string &eq_name, const FEValuesBase< dim > &test_fe, const std::vector< std::vector< double > > &test_shape_functions, const double &sourceterm_factor)
	This function is specifically created for assembly of cell matrices for the following equations, viz. More...

Protected Member Functions inherited from FuelCellShop::Equation::EquationBase< dim >
	EquationBase (FuelCell::SystemManagement &sys_management)
	Constructor. More...

virtual	~EquationBase ()
	Destructor. More...

virtual void	set_parameters (const std::vector< std::string > &name_dvar, const std::vector< double > &value_dvar, ParameterHandler &param)
	Set parameters using the parameter file, in order to run parametric/optimization studies. More...

virtual void	make_assemblers_bdry_constant_data (const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info)
	This function is overridden in the derived equation classes. More...

virtual void	make_assemblers_bdry_variable_data (const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	This function is overridden in the derived equation classes. More...

virtual void	make_internal_cell_couplings ()
	This function fills out `internal_cell_couplings` of a derived equation class. More...

virtual void	make_internal_flux_couplings ()
	This function fills out `internal_flux_couplings` (DG FEM only) of a derived equation class. More...

virtual void	make_component_materialID_value ()
	This function fills out `component_materialID_value` of a derived equation class. More...

virtual void	make_component_boundaryID_value ()
	This function fills out `component_boundaryID_value` of a derived equation class. More...

virtual void	make_boundary_types ()
	This function fills out `boundary_types` of a derived equation class. More...

virtual void	make_multi_boundary_types ()
	This function fills out `multi_boundary_types` of a derived equation class. More...

virtual void	make_output_types ()
	This function fills out `output_types` of a derived equation class. More...

virtual void	make_multi_output_types ()
	This function fills out `multi_output_types` of a derived equation class. More...

void	standard_to_block_wise (FullMatrix< double > &target) const
	This function changes the order of dealii::FullMatrix<double> `target` from standard to block-wise. More...

void	standard_to_block_wise (Vector< double > &target) const
	This function changes the order of dealii::Vector<double> `target` from standard to block-wise. More...

void	dealII_to_appframe (FuelCell::ApplicationCore::MatrixVector &dst, const FullMatrix< double > &src, const std::vector< unsigned int > &matrix_block_indices) const
	This function converts the standard ordered structure dealii::FullMatrix<double> `src` into the block-wise ordered structure FuelCell::ApplicationCore::MatrixVector `dst`. More...

void	dealII_to_appframe (FuelCell::ApplicationCore::FEVector &dst, const Vector< double > &src, const std::vector< unsigned int > &residual_indices) const
	This function converts the standard ordered structure dealii::Vector<double> `src` into the block-wise ordered structure FuelCell::ApplicationCore::FEVector `dst`. More...

bool	belongs_to_boundary (const unsigned int &tria_boundary_id, const unsigned int &param_boundary_id) const
	This function returns `true` if a boundary indicator of an external face on the triangulation coincides with a boundary indicator defined in the parameters file of a derived equation class. More...

void	print_caller_name (const std::string &caller_name) const
	This function is used to print out the name of another function that has been declared in the scope of this class, but not yet been implemented. More...

Protected Attributes
Boolean flags / Parameters
bool	irrev_heat_ccl
	This boolean data member indicates that the ir-reversible heating due to `ORR`, inside the cathode catalyst layer is ON or OFF. More...

bool	irrev_heat_acl
	This boolean data member indicates that the ir-reversible heating due to `HOR`, inside the anode catalyst layer is ON or OFF. More...

bool	rev_heat
	This boolean data member indicates that the reversible (entropic) heat source due to net reaction forming liquid water product is `ON` or `OFF`. More...

double	factor_rev_heat_ccl
	This represents the fraction of reversible heat released corresponding to half-cell reaction of `ORR`, inside the cathode catalyst layer. More...

bool	water_vapour_phase
	This boolean data member indicates that whether the water is produced in vapour phase (i.e. More...

bool	water_vap_heat_ccl
	This boolean data member indicates that the heat sink due to evaporation of water produced during the ORR inside the cathode catalyst layer is `ON` or `OFF`. More...

Kinetics Objects
FuelCellShop::Kinetics::BaseKinetics *	cathode_kinetics
	Pointer to Cathode Kinetics object, initialized in the constructor. More...

FuelCellShop::Kinetics::BaseKinetics *	anode_kinetics
	Pointer to Anode Kinetics object, initialized in the constructor. More...

ReactionHeat Objects
FuelCellShop::Equation::ReactionHeat *	cathode_reactionheat
	Pointer to Cathode ReactionHeat object. More...

FuelCellShop::Equation::ReactionHeat *	anode_reactionheat
	Pointer to Anode Reactionheat object. More...

Generic Constant Data
VariableInfo	x_oxygen
	VariableInfo structure corresponding to `"oxygen_molar_fraction"`. More...

VariableInfo	x_water
	VariableInfo structure corresponding to `"water_molar_fraction"`. More...

VariableInfo	phi_s
	VariableInfo structure corresponding to `"electronic_electrical_potential"`. More...

VariableInfo	lambda
	VariableInfo structure corresponding to `"membrane_water_content"`. More...

VariableInfo	phi_m
	VariableInfo structure corresponding to `"protonic_electrical_potential"`. More...

VariableInfo	t_rev
	VariableInfo structure corresponding to `"temperature_of_REV"`. More...

VariableInfo	s_liquid_water
	VariableInfo structure corresponding to `"liquid_water_saturation"`. More...

double	F
	Universal Faraday's constant. More...

double	M_water
	Molar weight of water in grams/mole. More...

Local CG FEM based assemblers - variable data (cell)
std::vector< std::vector < double > >	phi_T_cell
	$\mathbf{T}$ shape functions. More...

std::vector< std::vector < double > >	phi_xOxygen_cell
	$\mathbf{x_{O_2}}$ shape functions. More...

std::vector< std::vector < double > >	phi_phiS_cell
	$\mathbf{\phi_s}$ shape functions. More...

std::vector< std::vector < double > >	phi_phiM_cell
	$\mathbf{\phi_m}$ shape functions. More...

std::vector< std::vector < double > >	phi_xWater_cell
	$\mathbf{x_{H_2O}}$ shape functions. More...

std::vector< std::vector < double > >	phi_s_cell
	$\mathbf{s}$ shape functions. More...

std::vector< double >	current_cell
	Current produced [`A/cm^3`] at all quadrature points in the cell. More...

std::vector< double >	heat_cell
	Heat produced due to electrochemical reaction [`W/cm^2`] at all quadrature points in the cell. More...

std::vector< double >	dcurrent_dphiS_cell
	Derivative of current w.r.t. More...

std::vector< double >	dcurrent_dphiM_cell
	Derivative of current w.r.t. More...

std::vector< double >	dcurrent_dT_cell
	Derivative of current w.r.t. More...

std::vector< double >	dcurrent_dxOxygen_cell
	Derivative of current w.r.t. More...

std::vector< double >	dcurrent_dxWater_cell
	Derivative of current w.r.t. More...

std::vector< double >	dheat_dphiS_cell
	Derivative of heat produced w.r.t. More...

std::vector< double >	dheat_dphiM_cell
	Derivative of heat produced w.r.t. More...

std::vector< double >	dheat_dT_cell
	Derivative of heat produced w.r.t. More...

std::vector< double >	dheat_dxOxygen_cell
	Derivative of heat produced w.r.t. More...

std::vector< double >	dheat_dxWater_cell
	Derivative of heat produced w.r.t. More...

double	active_area_cell
	Active area [`cm^2/cm^3`] of the cell. More...

double	factor_protontranseq_cell
	Factor for. More...

double	factor_electrontranseq_cell
	Factor for. More...

double	factor_oxygentranseq_cell
	Factor for. More...

double	factor_watertranseq_cell
	Factor for. More...

double	factor_saturationtranseq_cell
	Factor for. More...

Counters
bool	cell_matrix_counter
	Counter set to TRUE when `cell_matrix` is being assembled. More...

bool	cell_residual_counter
	Counter set to TRUE when `cell_residual` is being assembled. More...

unsigned int	last_iter_cell
	Variable used to store the index in cell_info->global_data of the previous Newton solution The solution at the previous iteration is used to compute cell_matrix and cell_residual. More...

Protected Attributes inherited from FuelCellShop::Equation::EquationBase< dim >
unsigned int	dofs_per_cell
	Number of degrees of freedom per cell. More...

unsigned int	n_q_points_cell
	Number of quadrature points per cell. More...

unsigned int	n_q_points_bdry
	Number of quadrature points per boundary. More...

DoFHandler< dim > ::active_cell_iterator	cell
	Currently active DoFHandler<dim> active cell iterator. More...

DoFHandler< dim > ::active_face_iterator	bdry
	Currently active DoFHandler<dim> active boundary iterator. More...

std::vector< double >	JxW_cell
	Jacobian of mapping by Weight in the quadrature points of a cell. More...

std::vector< double >	JxW_bdry
	Jacobian of mapping by Weight in the quadrature points of a boundary. More...

std::vector< Point< dim > >	normal_vectors
	Normal vectors in the quadrature points of a boundary. More...

std::vector< std::vector < Point< dim > > >	tangential_vectors
	Tangential vectors in the quadrature points of a boundary. More...

FuelCell::SystemManagement *	system_management
	Pointer to the external YourApplication<dim>::system_management object. More...

couplings_map	internal_cell_couplings
	This object contains the info on how the equations and solution variables of a derived equation class are coupled. More...

couplings_map	internal_flux_couplings
	This object contains the info on how the "X" and "Y" of a derived equation class are coupled (DG FEM only). More...

component_materialID_value_map	component_materialID_value
	This object reflects the following structure (see FuelCell::InitialAndBoundaryData namespace docs): More...

component_boundaryID_value_map	component_boundaryID_value
	This object reflects the following structure (see FuelCell::InitialAndBoundaryData namespace docs): More...

std::vector< BoundaryType >	boundary_types
	The list of boundary types of a derived equation class. More...

std::vector< std::vector < BoundaryType > >	multi_boundary_types
	The list of multiple boundary types of a derived equation class. More...

std::vector< OutputType >	output_types
	The list of output types of a derived equation class. More...

std::vector< std::vector < OutputType > >	multi_output_types
	The list of multiple output types of a derived equation class. More...

std::string	equation_name
	The name of a derived equation class. More...

std::string	name_base_variable
	Const std::string member storing name of the base solution variable corresponding to the equation represented by this class. More...

std::vector< unsigned int >	matrix_block_indices
	The system matrix block indices (a derived equation class) drawn from the global structure (a derived equation class + other active equation classes included into the computation). More...

std::vector< unsigned int >	residual_indices
	The residual indices (a derived equation class) drawn from the global structure (a derived equation class + other active equation classes included into the computation). More...

std::vector< bool >	counter
	This vector contains the collection of internal "counters" used by the derived equation classes. More...

Methods and Data related to fluid transport equations
unsigned int	n_species
	Number of species, . More...

unsigned int	indexO2
	Keeps oxygen set of fluid transport equations. More...

unsigned int	indexH2
	Keeps hydrogen set of fluid transport equations. More...

unsigned int	indexH2O
	Keeps water vapor set of fluid transport equations. More...

double	multiplierO2
	Oxygen source multiplier, $\quad \left[ \frac{\text{g}}{A sec} \right]$ . More...

double	multiplierH2
	Hydrogen source multiplier, $\quad \left[ \frac{\text{g}}{A sec} \right]$ . More...

double	multiplierH2O
	Water vapor source multiplier, $\quad \left[ \frac{\text{g}}{A sec} \right]$ . More...

std::vector< double >	molar_mass
	Molar mass of pure gas, $M_i \quad \left[ \frac{\text{g}}{\text{mol}} \right]$ . More...

std::vector < FEValuesExtractors::Scalar >	density_extractors
	Density extractors. More...

FEValuesExtractors::Scalar	electronic_electrical_potential_extractor
	Electronic electrical potential extractor. More...

FEValuesExtractors::Scalar	protonic_electrical_potential_extractor
	Protonic electrical potential extractor. More...

std::vector< double >	T_mixture
	Constant temperature of species mixture in the quadrature points of a cell, $T_{\text{mixture}}^{\text{const}} \quad \left[ \text{K} \right]$ . More...

std::vector< double >	ORR_current_density
	ORR current density in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DORR_current_density_Doxygen_concentration
	ORR current density derivative with respect to oxygen concentration (gas, NOT gas-liquid) in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DORR_current_density_Delectronic_electrical_potential
	ORR current density derivative with respect to electronic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DORR_current_density_Dprotonic_electrical_potential
	ORR current density derivative with respect to protonic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	HOR_current_density
	HOR current density in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DHOR_current_density_Dhydrogen_concentration
	HOR current density derivative with respect to hydrogen concentration (gas, NOT gas-liquid) in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DHOR_current_density_Delectronic_electrical_potential
	HOR current density derivative with respect to electronic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	DHOR_current_density_Dprotonic_electrical_potential
	HOR current density derivative with respect to protonic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< std::vector < double > >	density_old
	Density of each species in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	electronic_electrical_potential_old
	Electronic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< double >	protonic_electrical_potential_old
	Protonic electrical potential in the quadrature points of a cell at a previous Newton iteration. More...

std::vector< std::vector < std::vector< double > > >	phi_density
	Density shape functions. More...

std::vector< std::vector < double > >	phi_electronic_electrical_potential
	Electronic electrical potential shape functions. More...

std::vector< std::vector < double > >	phi_protonic_electrical_potential
	Protonic electrical potential shape functions. More...

std::string	eq_generic_prefix
	For internal use only. More...

std::vector< std::string >	eq_postfixes
	For internal use only. More...

std::vector< std::string >	var_postfixes
	For internal use only. More...

std::string	eq_name
	For internal use only. More...

std::string	var_name
	For internal use only. More...

template<typename INFO >
void	make_assemblers_generic_constant_data (const INFO &InFo, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	This function computes some of the computational constants and Local CG FEM based assemblers - constant data (generic). More...

void	make_assemblers_cell_constant_data2 (const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info)
	As before but for fluid transport equations. More...

void	make_assemblers_cell_variable_data2 (const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer)
	As before but for fluid transport equations. More...

virtual void	make_matrix_block_indices ()
	This function fills out the max number of `matrix_block_indices` which need to be updated due to the source terms. More...

virtual void	make_residual_indices ()
	This function fills out the max number of `residual_indices` which need to be updated due to the source terms. More...

Additional Inherited Members
Public Attributes inherited from FuelCellShop::Equation::EquationBase< dim >
bool	variable_initial_data
	`true`, if variable initial data is prescribed on a part of the domain. More...

bool	variable_boundary_data
	`true`, if variable Dirichlet boundary conditions are prescribed on a part of the boundary. More...

Detailed Description

template<int dim>
class FuelCellShop::Equation::ReactionSourceTerms< dim >

This class assembles the reaction source terms for all other transport equations, if there's any.

Author: Madhur Bhaiya, 2013; Valentin N. Zingan, 2013 - all couplings with fluid transport equations

Constructor & Destructor Documentation

template<int dim>

FuelCellShop::Equation::ReactionSourceTerms< dim >::ReactionSourceTerms ( FuelCell::SystemManagement & system_management )

Constructor.

template<int dim>

virtual FuelCellShop::Equation::ReactionSourceTerms< dim >::~ReactionSourceTerms ( )

virtual

Destructor.

Member Function Documentation

template<int dim>

virtual void FuelCellShop::Equation::ReactionSourceTerms< dim >::adjust_internal_cell_couplings	(	std::vector< couplings_map > &	dst,
		const std::vector< FuelCellShop::Material::PureGas * > &	gases = `std::vector< FuelCellShop::Material::PureGas * >()`
	)

virtual

This function is used to adjust std::vector < internal_cell_couplings >, which is generated after getting internal_cell_couplings from all the equations being used in the application.

Note: It's very important to use this function, if we are considering source terms due to reaction in the catalyst layers. It's also noteworthy that this function should be used after whole vector of internal_cell_couplings is created, and BEFORE make_cell_couplings of SystemManagement is called.

template<int dim>

virtual void FuelCellShop::Equation::ReactionSourceTerms< dim >::assemble_cell_matrix	(	FuelCell::ApplicationCore::MatrixVector &	cell_matrices,
		const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &	cell_info,
		FuelCellShop::Layer::BaseLayer< dim > *const	layer
	)

virtual

Assemble local cell matrix.

Reimplemented from FuelCellShop::Equation::EquationBase< dim >.

template<int dim>

virtual void FuelCellShop::Equation::ReactionSourceTerms< dim >::assemble_cell_residual	(	FuelCell::ApplicationCore::FEVector &	cell_residual,
		const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &	cell_info,
		FuelCellShop::Layer::BaseLayer< dim > *const	layer
	)

virtual

Assemble local cell residual.

Reimplemented from FuelCellShop::Equation::EquationBase< dim >.

template<int dim>

virtual void FuelCellShop::Equation::ReactionSourceTerms< dim >::assemble_matrix_for_equation	(	FuelCell::ApplicationCore::MatrixVector &	cell_matrices,
		const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &	cell_info,
		const std::string &	eq_name,
		const FEValuesBase< dim > &	test_fe,
		const std::vector< std::vector< double > > &	test_shape_functions,
		const double &	sourceterm_factor
	)

protectedvirtual

This function is specifically created for assembly of cell matrices for the following equations, viz.

"Proton Transport Equation"
"Electron Transport Equation"
"Ficks Transport Equation - oxygen"
"Ficks Transport Equation - water"
"Thermal Transport Equation"
"Liquid Water Saturation Transport Equation"

Cell matrix terms for the abovementioned equations follow a similar pattern, using different factors; hence this function avoids using repeated lines of code for each of these equations in assemble_cell_matrix method. The argument list is defined as follows:

Parameters

-	first corresponds to `FuelCell::ApplicationCore::MatrixVector` which we need to fill.
-	second corresponds to typename FuelCell::ApplicationCore::DoFApplication<dim>::CellInfo object; used to access fe elements for variables other than test function.
-	third corresponds to `std::string` for the name of the equation for which we are doing the assembly. It should match with names mentioned above.
-	fourth corresponds to `FEValuesBase` (fe discretization) used for the test function i.e. equation for which assembly is being done.
-	fifth corresponds to shape functions for the test function, filled already by make_assemblers_cell_variable_data.
-	fifth corresponds to the factor used to multiply with the current density in source term for a particular equation.

Warning: For the DEVELOPERS: This function should only be used after make_assemblers_cell_variable_data has been called in assemble_cell_matrix, otherwise it is bound to give wrong results.

template<int dim>

virtual void FuelCellShop::Equation::ReactionSourceTerms< dim >::declare_parameters ( ParameterHandler & param ) const

virtual

Declare parameters.

Reimplemented from FuelCellShop::Equation::EquationBase< dim >.

template<int dim>

FuelCellShop::Kinetics::BaseKinetics* FuelCellShop::Equation::ReactionSourceTerms< dim >::get_anode_kinetics ( ) const

inline

Accessor for anode catalyst layer FuelCellShop::Kinetics::BaseKinetics pointer.

References FuelCellShop::Equation::ReactionSourceTerms< dim >::anode_kinetics.

template<int dim>

FuelCellShop::Kinetics::BaseKinetics* FuelCellShop::Equation::ReactionSourceTerms< dim >::get_cathode_kinetics ( ) const

inline

Accessor for cathode catalyst layer FuelCellShop::Kinetics::BaseKinetics pointer.

References FuelCellShop::Equation::ReactionSourceTerms< dim >::cathode_kinetics.

template<int dim>

double FuelCellShop::Equation::ReactionSourceTerms< dim >::get_factor_rev_heat_ccl ( ) const

inline

Method to get the fraction of reversible heat released corresponding to half-cell reaction of ORR, inside the cathode catalyst layer (factor_rev_heat_ccl).