| _initialize(ParameterHandler ¶m) | AppFrame::newtonBase |  | 
  | app | AppFrame::ApplicationCopy | protected | 
  | ApplicationBase(boost::shared_ptr< ApplicationData > ex_data=boost::shared_ptr< ApplicationData >()) | AppFrame::ApplicationBase | inline | 
  | ApplicationBase(const ApplicationBase &other) | AppFrame::ApplicationBase | inline | 
  | ApplicationCopy(ApplicationBase &ex_app) | AppFrame::ApplicationCopy | inline | 
  | assemble() | AppFrame::newtonBase | virtual | 
  | assemble_now | AppFrame::newtonBase | protected | 
  | assemble_threshold | AppFrame::newtonBase | protected | 
  | bad_derivative | AppFrame::NewtonBasic | static | 
  | clear() | AppFrame::ApplicationBase | inlinevirtual | 
  | clear_events() | AppFrame::ApplicationBase | inline | 
  | compute_residual | AppFrame::newtonBase | protected | 
  | control | AppFrame::newtonBase |  | 
  | data | AppFrame::ApplicationBase | protected | 
  | data_out(const std::string &filename, const FEVectors &src) | AppFrame::ApplicationCopy | inlinevirtual | 
  | AppFrame::ApplicationBase::data_out(const std::string &filename, const FEVectors &src, const std::vector< std::string >) | AppFrame::ApplicationBase | inlinevirtual | 
  | debug | AppFrame::newtonBase | protected | 
  | debug_residual | AppFrame::newtonBase | protected | 
  | debug_solution | AppFrame::newtonBase | protected | 
  | debug_update | AppFrame::newtonBase | protected | 
  | declare_parameters(ParameterHandler ¶m) | AppFrame::NewtonBasic | virtual | 
  | default_residual | AppFrame::newtonBase | protected | 
  | estimate(const FEVectors &src) | AppFrame::ApplicationCopy | inlinevirtual | 
  | evaluate(const FEVectors &src) | AppFrame::ApplicationCopy | inlinevirtual | 
  | get_data() | AppFrame::ApplicationBase | inline | 
  | get_data() const | AppFrame::ApplicationBase | inline | 
  | grid_out(const std::string &filename) const | AppFrame::ApplicationCopy | inlinevirtual | 
  | id() const | AppFrame::ApplicationCopy | inlinevirtual | 
  | init_vector(FEVector &dst) const | AppFrame::ApplicationCopy | inlinevirtual | 
  | initialize(ParameterHandler ¶m) | AppFrame::NewtonBasic | virtual | 
  | initialize_initial_guess(BlockVector< double > &dst) | AppFrame::newtonBase |  | 
  | newtonBase(ApplicationBase &app) | AppFrame::newtonBase |  | 
  | NewtonBasic(ApplicationBase &app) | AppFrame::NewtonBasic |  | 
  | notifications | AppFrame::ApplicationBase | protected | 
  | notify(const Event &reason) | AppFrame::ApplicationCopy | inlinevirtual | 
  | numIter | AppFrame::newtonBase |  | 
  | print_caller_name(const std::string &caller_name) const | AppFrame::ApplicationBase | inlineprotected | 
  | print_parameters_to_file(ParameterHandler ¶m, const std::string &file_name, const ParameterHandler::OutputStyle &style) | AppFrame::ApplicationBase | inline | 
  | remesh() | AppFrame::ApplicationCopy | inlinevirtual | 
  | residual(AppFrame::FEVector &dst, const AppFrame::FEVectors &rhs) | AppFrame::newtonBase | virtual | 
  | AppFrame::ApplicationBase::residual(FEVector &dst, const FEVectors &src, bool apply_boundaries=true) | AppFrame::ApplicationBase | inlinevirtual | 
  | solve(FEVector &u, const FEVectors &in_vectors) | AppFrame::NewtonBasic | virtual | 
  | start_vector(FEVector &dst, std::string caller) const | AppFrame::ApplicationCopy | inlinevirtual | 
  | step | AppFrame::NewtonBasic | private | 
  | threshold(double new_value) | AppFrame::newtonBase |  | 
  | Tsolve(FEVector &start, const FEVectors &rhs) | AppFrame::ApplicationCopy | inlinevirtual | 
  | weight | AppFrame::NewtonBasic | private | 
  | ~ApplicationBase() | AppFrame::ApplicationBase | inlinevirtual | 
  | ~ApplicationCopy() | AppFrame::ApplicationCopy | inline | 
  | ~NewtonBasic() | AppFrame::NewtonBasic |  |